Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Gm27838-201ENSMUST00000184829 128 ntBASIC19.05■□□□□ 0.64
Shank3Q4ACU6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Gm14042-201ENSMUST00000120139 833 ntBASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank3Q4ACU6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Gm43433-201ENSMUST00000196573 481 ntBASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank3Q4ACU6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.02■□□□□ 0.64
Shank3Q4ACU6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Gm14928-201ENSMUST00000120198 477 ntBASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank3Q4ACU6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm29310-201ENSMUST00000185468 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21825-201ENSMUST00000185728 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm29109-201ENSMUST00000185895 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21896-201ENSMUST00000186520 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21873-201ENSMUST00000186728 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21794-201ENSMUST00000187056 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21880-201ENSMUST00000187275 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21826-201ENSMUST00000187451 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21198-201ENSMUST00000188393 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21749-201ENSMUST00000189343 696 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms