Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm18062-201ENSMUST00000208020 547 ntBASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Gm18055-201ENSMUST00000208254 547 ntBASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam196aQ3USH1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Mir1938-201ENSMUST00000158746 100 ntBASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gm45384-201ENSMUST00000210451 277 ntBASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Gm9899-201ENSMUST00000065519 555 ntBASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam196aQ3USH1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Mir7085-201ENSMUST00000184353 66 ntBASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Gm28630-201ENSMUST00000187806 498 ntBASIC15.49■□□□□ 0.07
Fam196aQ3USH1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Fam196aQ3USH1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gm23984-201ENSMUST00000157139 203 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gm44719-201ENSMUST00000206404 149 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Gm18049-201ENSMUST00000208909 581 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.48■□□□□ 0.07
Fam196aQ3USH1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fam196aQ3USH1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fam196aQ3USH1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fam196aQ3USH1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fam196aQ3USH1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fam196aQ3USH1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms