Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Mir5132-201ENSMUST00000175166 71 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm27701-201ENSMUST00000184498 110 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm14723-201ENSMUST00000118686 215 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm9797-201ENSMUST00000052902 613 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gm5356-201ENSMUST00000093326 615 ntBASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Spg11Q3UHA3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Spg11Q3UHA3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Gm9522-201ENSMUST00000182394 926 ntBASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Gm37466-201ENSMUST00000195692 652 ntBASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Spg11Q3UHA3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Gm13350-201ENSMUST00000120519 479 ntBASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Gm15782-201ENSMUST00000121073 445 ntBASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spg11Q3UHA3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm8318-201ENSMUST00000182954 872 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm18056-201ENSMUST00000207670 568 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm18061-201ENSMUST00000208350 562 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms