Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf180Q3U827 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf180Q3U827 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf180Q3U827 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf180Q3U827 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Rnf180Q3U827 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Gm27731-201ENSMUST00000185192 107 ntBASIC18.03■□□□□ 0.48
Rnf180Q3U827 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rnf180Q3U827 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.02■□□□□ 0.48
Rnf180Q3U827 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.02■□□□□ 0.48
Rnf180Q3U827 Gm37714-201ENSMUST00000194742 342 ntBASIC18.02■□□□□ 0.48
Rnf180Q3U827 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Rnf180Q3U827 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf180Q3U827 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf180Q3U827 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Gm27486-201ENSMUST00000184923 80 ntBASIC18.01■□□□□ 0.47
Rnf180Q3U827 Gm4857-201ENSMUST00000192718 785 ntBASIC18.01■□□□□ 0.47
Rnf180Q3U827 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.01■□□□□ 0.47
Rnf180Q3U827 Gm43068-201ENSMUST00000201095 1273 ntBASIC18.01■□□□□ 0.47
Rnf180Q3U827 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Gm9229-201ENSMUST00000222777 126 ntBASIC18.01■□□□□ 0.47
Rnf180Q3U827 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.01■□□□□ 0.47
Rnf180Q3U827 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf180Q3U827 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18■□□□□ 0.47
Rnf180Q3U827 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18■□□□□ 0.47
Rnf180Q3U827 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Rnf180Q3U827 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 Gm5354-201ENSMUST00000182417 973 ntBASIC18■□□□□ 0.47
Rnf180Q3U827 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC18■□□□□ 0.47
Rnf180Q3U827 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18■□□□□ 0.47
Rnf180Q3U827 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 Gm10461-201ENSMUST00000202073 4786 ntBASIC18■□□□□ 0.47
Rnf180Q3U827 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf180Q3U827 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf180Q3U827 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf180Q3U827 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.99■□□□□ 0.47
Rnf180Q3U827 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf180Q3U827 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf180Q3U827 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms