Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Gm2810-201ENSMUST00000118681 990 ntBASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Gm6888-201ENSMUST00000221983 706 ntBASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna5Q2MKA5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Gm15483-201ENSMUST00000120338 456 ntBASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna5Q2MKA5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chrna5Q2MKA5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrna5Q2MKA5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna5Q2MKA5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Gm29541-201ENSMUST00000191351 678 ntBASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.32■□□□□ 0.52
Chrna5Q2MKA5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Gm13015-201ENSMUST00000118674 204 ntBASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Gm13823-201ENSMUST00000119930 345 ntBASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.31■□□□□ 0.52
Chrna5Q2MKA5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms