Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.76□□□□□ -0.21
Chd8Q09XV5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.76□□□□□ -0.21
Chd8Q09XV5 Gm15483-201ENSMUST00000120338 456 ntBASIC13.76□□□□□ -0.21
Chd8Q09XV5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd8Q09XV5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.75□□□□□ -0.21
Chd8Q09XV5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Gm5370-201ENSMUST00000187187 574 ntBASIC13.75□□□□□ -0.21
Chd8Q09XV5 Gm36967-201ENSMUST00000193814 266 ntBASIC13.75□□□□□ -0.21
Chd8Q09XV5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd8Q09XV5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gm16026-204ENSMUST00000162652 683 ntBASIC13.74□□□□□ -0.21
Chd8Q09XV5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Chd8Q09XV5 Gm7783-201ENSMUST00000204795 781 ntBASIC13.74□□□□□ -0.21
Chd8Q09XV5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chd8Q09XV5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Gm9522-201ENSMUST00000182394 926 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms