Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.2□□□□□ -0.14
Scn1bP97952 Gm18958-201ENSMUST00000174258 762 ntBASIC14.2□□□□□ -0.14
Scn1bP97952 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.2□□□□□ -0.14
Scn1bP97952 Timm23-208ENSMUST00000226683 750 ntBASIC14.2□□□□□ -0.14
Scn1bP97952 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Scn1bP97952 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn1bP97952 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1bP97952 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1bP97952 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1bP97952 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1bP97952 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1bP97952 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn1bP97952 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn1bP97952 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Scn1bP97952 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Scn1bP97952 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn1bP97952 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.19□□□□□ -0.14
Scn1bP97952 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.19□□□□□ -0.14
Scn1bP97952 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn1bP97952 Gm10812-201ENSMUST00000099864 546 ntBASIC14.19□□□□□ -0.14
Scn1bP97952 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn1bP97952 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.19□□□□□ -0.14
Scn1bP97952 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.19□□□□□ -0.14
Scn1bP97952 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1bP97952 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn1bP97952 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn1bP97952 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scn1bP97952 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn1bP97952 Gm22240-201ENSMUST00000175225 82 ntBASIC14.18□□□□□ -0.14
Scn1bP97952 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn1bP97952 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.18□□□□□ -0.14
Scn1bP97952 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.18□□□□□ -0.14
Scn1bP97952 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn1bP97952 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn1bP97952 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Scn1bP97952 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn1bP97952 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1bP97952 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn1bP97952 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.17□□□□□ -0.14
Scn1bP97952 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.17□□□□□ -0.14
Scn1bP97952 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.17□□□□□ -0.14
Scn1bP97952 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn1bP97952 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn1bP97952 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn1bP97952 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.17□□□□□ -0.14
Scn1bP97952 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1bP97952 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms