Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.63□□□□□ -0.07
Nkx3-2P97503 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.63□□□□□ -0.07
Nkx3-2P97503 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.62□□□□□ -0.07
Nkx3-2P97503 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.62□□□□□ -0.07
Nkx3-2P97503 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Gm6257-201ENSMUST00000163864 910 ntBASIC14.62□□□□□ -0.07
Nkx3-2P97503 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Gm27646-201ENSMUST00000183989 110 ntBASIC14.62□□□□□ -0.07
Nkx3-2P97503 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Gm15590-201ENSMUST00000078419 552 ntBASIC14.62□□□□□ -0.07
Nkx3-2P97503 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Nkx3-2P97503 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm14140-201ENSMUST00000119999 995 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm8000-201ENSMUST00000188378 592 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.61□□□□□ -0.07
Nkx3-2P97503 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx3-2P97503 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms