Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.04□□□□□ -0.32
Npas1P97459 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.04□□□□□ -0.32
Npas1P97459 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Gm44450-201ENSMUST00000199528 114 ntBASIC13.04□□□□□ -0.32
Npas1P97459 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.04□□□□□ -0.32
Npas1P97459 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Npas1P97459 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npas1P97459 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Npas1P97459 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Npas1P97459 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.03□□□□□ -0.32
Npas1P97459 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Npas1P97459 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.03□□□□□ -0.32
Npas1P97459 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.03□□□□□ -0.32
Npas1P97459 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npas1P97459 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.02□□□□□ -0.32
Npas1P97459 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npas1P97459 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.02□□□□□ -0.32
Npas1P97459 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.02□□□□□ -0.33
Npas1P97459 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.02□□□□□ -0.33
Npas1P97459 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.02□□□□□ -0.33
Npas1P97459 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.02□□□□□ -0.33
Npas1P97459 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Npas1P97459 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Npas1P97459 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Npas1P97459 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Npas1P97459 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Npas1P97459 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npas1P97459 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Npas1P97459 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Npas1P97459 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Npas1P97459 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Npas1P97459 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.01□□□□□ -0.33
Npas1P97459 Gm715-201ENSMUST00000117865 831 ntBASIC13.01□□□□□ -0.33
Npas1P97459 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Npas1P97459 Gm12134-201ENSMUST00000122109 520 ntBASIC13.01□□□□□ -0.33
Npas1P97459 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms