Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pfn1P62962 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.05□□□□□ -0.48
Pfn1P62962 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Gm13186-201ENSMUST00000118031 316 ntBASIC12.05□□□□□ -0.48
Pfn1P62962 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.05□□□□□ -0.48
Pfn1P62962 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.05□□□□□ -0.48
Pfn1P62962 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.05□□□□□ -0.48
Pfn1P62962 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pfn1P62962 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.05□□□□□ -0.48
Pfn1P62962 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.05□□□□□ -0.48
Pfn1P62962 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pfn1P62962 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pfn1P62962 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfn1P62962 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Mir1199-201ENSMUST00000117015 119 ntBASIC12.04□□□□□ -0.48
Pfn1P62962 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.04□□□□□ -0.48
Pfn1P62962 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.04□□□□□ -0.48
Pfn1P62962 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.04□□□□□ -0.48
Pfn1P62962 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.04□□□□□ -0.48
Pfn1P62962 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Pfn1P62962 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pfn1P62962 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfn1P62962 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Gm20760-201ENSMUST00000179197 648 ntBASIC12.03□□□□□ -0.48
Pfn1P62962 Gm18115-201ENSMUST00000221209 621 ntBASIC12.03□□□□□ -0.48
Pfn1P62962 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pfn1P62962 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfn1P62962 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.03□□□□□ -0.48
Pfn1P62962 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pfn1P62962 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms