Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lsm3P62311 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.19□□□□□ -0.14
Lsm3P62311 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lsm3P62311 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.19□□□□□ -0.14
Lsm3P62311 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.19□□□□□ -0.14
Lsm3P62311 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lsm3P62311 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm3P62311 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lsm3P62311 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm3P62311 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Lsm3P62311 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Gm12134-201ENSMUST00000122109 520 ntBASIC14.18□□□□□ -0.14
Lsm3P62311 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Gm5874-201ENSMUST00000096101 508 ntBASIC14.18□□□□□ -0.14
Lsm3P62311 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.18□□□□□ -0.14
Lsm3P62311 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm3P62311 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lsm3P62311 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.17□□□□□ -0.14
Lsm3P62311 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lsm3P62311 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.17□□□□□ -0.14
Lsm3P62311 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm3P62311 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm3P62311 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm3P62311 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms