Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nphp4P59240 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nphp4P59240 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.84■□□□□ 0.93
Nphp4P59240 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC20.84■□□□□ 0.93
Nphp4P59240 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.84■□□□□ 0.93
Nphp4P59240 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp4P59240 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nphp4P59240 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nphp4P59240 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nphp4P59240 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
Nphp4P59240 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.83■□□□□ 0.93
Nphp4P59240 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.83■□□□□ 0.93
Nphp4P59240 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.83■□□□□ 0.93
Nphp4P59240 Gm15483-201ENSMUST00000120338 456 ntBASIC20.83■□□□□ 0.93
Nphp4P59240 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 AA543401-201ENSMUST00000164248 1269 ntBASIC20.83■□□□□ 0.93
Nphp4P59240 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.83■□□□□ 0.93
Nphp4P59240 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC20.83■□□□□ 0.93
Nphp4P59240 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp4P59240 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nphp4P59240 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nphp4P59240 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Nphp4P59240 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Nphp4P59240 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Nphp4P59240 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Nphp4P59240 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Gm13233-201ENSMUST00000118760 1443 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Gm13244-201ENSMUST00000118855 1446 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 AC131743.5-201ENSMUST00000220775 1618 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.82■□□□□ 0.92
Nphp4P59240 Gm15593-201ENSMUST00000122085 1008 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.82■□□□□ 0.92
Nphp4P59240 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
Nphp4P59240 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Nphp4P59240 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nphp4P59240 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Gm5049-201ENSMUST00000195878 1590 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Gm8096-201ENSMUST00000209921 1591 ntBASIC20.82■□□□□ 0.92
Nphp4P59240 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.82■□□□□ 0.92
Nphp4P59240 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp4P59240 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.81■□□□□ 0.92
Nphp4P59240 Gm7774-201ENSMUST00000200064 533 ntBASIC20.81■□□□□ 0.92
Nphp4P59240 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC20.81■□□□□ 0.92
Nphp4P59240 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nphp4P59240 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.81■□□□□ 0.92
Nphp4P59240 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Nphp4P59240 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nphp4P59240 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp4P59240 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Nphp4P59240 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Gm15693-201ENSMUST00000120470 637 ntBASIC20.8■□□□□ 0.92
Nphp4P59240 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Nphp4P59240 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms