Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
NcanP55066 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Gm14042-201ENSMUST00000120139 833 ntBASIC16.22■□□□□ 0.19
NcanP55066 Gm17150-201ENSMUST00000165577 381 ntBASIC16.22■□□□□ 0.19
NcanP55066 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.22■□□□□ 0.19
NcanP55066 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.22■□□□□ 0.19
NcanP55066 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NcanP55066 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NcanP55066 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NcanP55066 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.21■□□□□ 0.19
NcanP55066 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.21■□□□□ 0.19
NcanP55066 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NcanP55066 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.21■□□□□ 0.19
NcanP55066 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NcanP55066 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NcanP55066 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NcanP55066 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NcanP55066 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.2■□□□□ 0.18
NcanP55066 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.2■□□□□ 0.18
NcanP55066 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.2■□□□□ 0.18
NcanP55066 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.2■□□□□ 0.18
NcanP55066 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
NcanP55066 Gm12091-201ENSMUST00000146791 830 ntBASIC16.2■□□□□ 0.18
NcanP55066 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.2■□□□□ 0.18
NcanP55066 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.2■□□□□ 0.18
NcanP55066 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.2■□□□□ 0.18
NcanP55066 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.2■□□□□ 0.18
NcanP55066 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
NcanP55066 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.2■□□□□ 0.18
NcanP55066 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NcanP55066 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.2■□□□□ 0.18
NcanP55066 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.2■□□□□ 0.18
NcanP55066 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NcanP55066 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NcanP55066 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.19■□□□□ 0.18
NcanP55066 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NcanP55066 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NcanP55066 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NcanP55066 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.19■□□□□ 0.18
NcanP55066 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NcanP55066 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.19■□□□□ 0.18
NcanP55066 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.19■□□□□ 0.18
NcanP55066 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
NcanP55066 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NcanP55066 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms