Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.36■□□□□ 0.05
Atxn1P54254 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atxn1P54254 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Atxn1P54254 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.35■□□□□ 0.05
Atxn1P54254 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Atxn1P54254 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.35■□□□□ 0.05
Atxn1P54254 Gm37153-201ENSMUST00000193637 231 ntBASIC15.35■□□□□ 0.05
Atxn1P54254 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.35■□□□□ 0.05
Atxn1P54254 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Atxn1P54254 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Atxn1P54254 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atxn1P54254 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.35■□□□□ 0.05
Atxn1P54254 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Atxn1P54254 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.34■□□□□ 0.05
Atxn1P54254 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Atxn1P54254 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Atxn1P54254 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Atxn1P54254 Gm14127-201ENSMUST00000117906 678 ntBASIC15.34■□□□□ 0.05
Atxn1P54254 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Atxn1P54254 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.34■□□□□ 0.05
Atxn1P54254 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Atxn1P54254 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Atxn1P54254 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Atxn1P54254 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atxn1P54254 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Atxn1P54254 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atxn1P54254 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Atxn1P54254 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.33■□□□□ 0.04
Atxn1P54254 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.33■□□□□ 0.04
Atxn1P54254 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
Atxn1P54254 Gm22175-201ENSMUST00000175007 78 ntBASIC15.33■□□□□ 0.04
Atxn1P54254 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Atxn1P54254 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.33■□□□□ 0.04
Atxn1P54254 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Atxn1P54254 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.33■□□□□ 0.04
Atxn1P54254 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atxn1P54254 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atxn1P54254 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Atxn1P54254 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms