Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.38□□□□□ -0.11
Ptx3P48759 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ptx3P48759 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ptx3P48759 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.38□□□□□ -0.11
Ptx3P48759 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.38□□□□□ -0.11
Ptx3P48759 Gm37935-201ENSMUST00000192012 982 ntBASIC14.38□□□□□ -0.11
Ptx3P48759 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.38□□□□□ -0.11
Ptx3P48759 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.38□□□□□ -0.11
Ptx3P48759 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ptx3P48759 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptx3P48759 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ptx3P48759 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.37□□□□□ -0.11
Ptx3P48759 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ptx3P48759 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ptx3P48759 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ptx3P48759 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.37□□□□□ -0.11
Ptx3P48759 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.37□□□□□ -0.11
Ptx3P48759 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.37□□□□□ -0.11
Ptx3P48759 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Gm18489-201ENSMUST00000172565 551 ntBASIC14.37□□□□□ -0.11
Ptx3P48759 Gm2213-201ENSMUST00000197485 688 ntBASIC14.37□□□□□ -0.11
Ptx3P48759 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.37□□□□□ -0.11
Ptx3P48759 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.37□□□□□ -0.11
Ptx3P48759 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptx3P48759 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.37□□□□□ -0.11
Ptx3P48759 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.36□□□□□ -0.11
Ptx3P48759 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Ptx3P48759 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.36□□□□□ -0.11
Ptx3P48759 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.36□□□□□ -0.11
Ptx3P48759 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ptx3P48759 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ptx3P48759 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.36□□□□□ -0.11
Ptx3P48759 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptx3P48759 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ptx3P48759 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptx3P48759 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptx3P48759 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ptx3P48759 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.35□□□□□ -0.11
Ptx3P48759 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms