Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.13□□□□□ -0.31
Hist1h1dP43277 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.12□□□□□ -0.31
Hist1h1dP43277 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1dP43277 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.11□□□□□ -0.31
Hist1h1dP43277 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1dP43277 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Gm6623-201ENSMUST00000173570 544 ntBASIC13.1□□□□□ -0.31
Hist1h1dP43277 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Gm18032-201ENSMUST00000222541 538 ntBASIC13.1□□□□□ -0.31
Hist1h1dP43277 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms