Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Gm8318-201ENSMUST00000182954 872 ntBASIC14.2□□□□□ -0.14
Nkx2-2P42586 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.2□□□□□ -0.14
Nkx2-2P42586 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.19□□□□□ -0.14
Nkx2-2P42586 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.19□□□□□ -0.14
Nkx2-2P42586 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.19□□□□□ -0.14
Nkx2-2P42586 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-2P42586 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Gm7862-201ENSMUST00000121461 292 ntBASIC14.18□□□□□ -0.14
Nkx2-2P42586 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 BC037039-201ENSMUST00000192003 2205 ntBASIC14.18□□□□□ -0.14
Nkx2-2P42586 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-2P42586 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Gm7230-201ENSMUST00000173026 815 ntBASIC14.17□□□□□ -0.14
Nkx2-2P42586 Mir8098-201ENSMUST00000184011 137 ntBASIC14.17□□□□□ -0.14
Nkx2-2P42586 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-2P42586 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-2P42586 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-2P42586 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.16□□□□□ -0.14
Nkx2-2P42586 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms