Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm15487-201ENSMUST00000122373 465 ntBASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm9063-201ENSMUST00000223299 582 ntBASIC15.9■□□□□ 0.14
Cxcl12P40224 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.9■□□□□ 0.14
Cxcl12P40224 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.9■□□□□ 0.14
Cxcl12P40224 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.9■□□□□ 0.14
Cxcl12P40224 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.89■□□□□ 0.13
Cxcl12P40224 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Gm27838-201ENSMUST00000184829 128 ntBASIC15.89■□□□□ 0.13
Cxcl12P40224 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.89■□□□□ 0.13
Cxcl12P40224 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.89■□□□□ 0.13
Cxcl12P40224 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cxcl12P40224 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cxcl12P40224 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Gm14928-201ENSMUST00000120198 477 ntBASIC15.88■□□□□ 0.13
Cxcl12P40224 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Gm16026-204ENSMUST00000162652 683 ntBASIC15.88■□□□□ 0.13
Cxcl12P40224 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.88■□□□□ 0.13
Cxcl12P40224 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cxcl12P40224 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Cxcl12P40224 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.87■□□□□ 0.13
Cxcl12P40224 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cxcl12P40224 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.87■□□□□ 0.13
Cxcl12P40224 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Gm28630-201ENSMUST00000187806 498 ntBASIC15.87■□□□□ 0.13
Cxcl12P40224 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.87■□□□□ 0.13
Cxcl12P40224 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Gm25857-201ENSMUST00000082788 129 ntBASIC15.87■□□□□ 0.13
Cxcl12P40224 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms