Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdkn1aP39689 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Gm27300-201ENSMUST00000184085 97 ntBASIC12.77□□□□□ -0.37
Cdkn1aP39689 Gm27335-201ENSMUST00000184758 97 ntBASIC12.77□□□□□ -0.37
Cdkn1aP39689 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.77□□□□□ -0.37
Cdkn1aP39689 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cdkn1aP39689 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.76□□□□□ -0.37
Cdkn1aP39689 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.76□□□□□ -0.37
Cdkn1aP39689 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.76□□□□□ -0.37
Cdkn1aP39689 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.76□□□□□ -0.37
Cdkn1aP39689 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdkn1aP39689 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.75□□□□□ -0.37
Cdkn1aP39689 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.75□□□□□ -0.37
Cdkn1aP39689 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdkn1aP39689 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn1aP39689 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms