Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.26■□□□□ 0.03
HmgclP38060 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.26■□□□□ 0.03
HmgclP38060 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.26■□□□□ 0.03
HmgclP38060 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.26■□□□□ 0.03
HmgclP38060 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HmgclP38060 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HmgclP38060 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HmgclP38060 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.25■□□□□ 0.03
HmgclP38060 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Gm7862-201ENSMUST00000121461 292 ntBASIC15.25■□□□□ 0.03
HmgclP38060 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HmgclP38060 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.25■□□□□ 0.03
HmgclP38060 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HmgclP38060 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.25■□□□□ 0.03
HmgclP38060 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HmgclP38060 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HmgclP38060 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.25■□□□□ 0.03
HmgclP38060 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HmgclP38060 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.24■□□□□ 0.03
HmgclP38060 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.24■□□□□ 0.03
HmgclP38060 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.24■□□□□ 0.03
HmgclP38060 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.24■□□□□ 0.03
HmgclP38060 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.24■□□□□ 0.03
HmgclP38060 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.24■□□□□ 0.03
HmgclP38060 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HmgclP38060 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.24■□□□□ 0.03
HmgclP38060 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.24■□□□□ 0.03
HmgclP38060 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HmgclP38060 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HmgclP38060 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HmgclP38060 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Gm7230-201ENSMUST00000173026 815 ntBASIC15.23■□□□□ 0.03
HmgclP38060 Gm8318-201ENSMUST00000182954 872 ntBASIC15.23■□□□□ 0.03
HmgclP38060 Mir8098-201ENSMUST00000184011 137 ntBASIC15.23■□□□□ 0.03
HmgclP38060 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HmgclP38060 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HmgclP38060 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HmgclP38060 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HmgclP38060 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
HmgclP38060 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms