Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
LdlrP35951 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LdlrP35951 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LdlrP35951 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.42■□□□□ 0.06
LdlrP35951 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Gm13884-201ENSMUST00000118103 829 ntBASIC15.42■□□□□ 0.06
LdlrP35951 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Gm5864-201ENSMUST00000202263 970 ntBASIC15.42■□□□□ 0.06
LdlrP35951 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.42■□□□□ 0.06
LdlrP35951 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LdlrP35951 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LdlrP35951 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LdlrP35951 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.41■□□□□ 0.06
LdlrP35951 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LdlrP35951 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.41■□□□□ 0.06
LdlrP35951 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.41■□□□□ 0.06
LdlrP35951 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LdlrP35951 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.4■□□□□ 0.06
LdlrP35951 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.4■□□□□ 0.06
LdlrP35951 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.4■□□□□ 0.06
LdlrP35951 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.4■□□□□ 0.06
LdlrP35951 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LdlrP35951 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LdlrP35951 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.4■□□□□ 0.06
LdlrP35951 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.4■□□□□ 0.06
LdlrP35951 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.4■□□□□ 0.06
LdlrP35951 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.4■□□□□ 0.06
LdlrP35951 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.4■□□□□ 0.06
LdlrP35951 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LdlrP35951 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LdlrP35951 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.39■□□□□ 0.05
LdlrP35951 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.39■□□□□ 0.05
LdlrP35951 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
LdlrP35951 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LdlrP35951 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LdlrP35951 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.39■□□□□ 0.05
LdlrP35951 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.39■□□□□ 0.05
LdlrP35951 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.39■□□□□ 0.05
LdlrP35951 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.39■□□□□ 0.05
LdlrP35951 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LdlrP35951 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LdlrP35951 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LdlrP35951 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.38■□□□□ 0.05
LdlrP35951 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LdlrP35951 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms