Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rab3dP35276 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rab3dP35276 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.98□□□□□ -0.33
Rab3dP35276 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.98□□□□□ -0.33
Rab3dP35276 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.98□□□□□ -0.33
Rab3dP35276 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab3dP35276 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.98□□□□□ -0.33
Rab3dP35276 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rab3dP35276 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rab3dP35276 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.97□□□□□ -0.33
Rab3dP35276 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rab3dP35276 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rab3dP35276 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.97□□□□□ -0.33
Rab3dP35276 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.97□□□□□ -0.33
Rab3dP35276 Gm7370-201ENSMUST00000219471 767 ntBASIC12.97□□□□□ -0.33
Rab3dP35276 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.97□□□□□ -0.33
Rab3dP35276 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rab3dP35276 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rab3dP35276 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab3dP35276 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.96□□□□□ -0.33
Rab3dP35276 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rab3dP35276 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.96□□□□□ -0.33
Rab3dP35276 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.96□□□□□ -0.33
Rab3dP35276 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.96□□□□□ -0.33
Rab3dP35276 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rab3dP35276 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rab3dP35276 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.96□□□□□ -0.33
Rab3dP35276 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
Rab3dP35276 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab3dP35276 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab3dP35276 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab3dP35276 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab3dP35276 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms