Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm18057-201ENSMUST00000208220 503 ntBASIC14.29□□□□□ -0.12
Sftpa1P35242 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sftpa1P35242 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.29□□□□□ -0.12
Sftpa1P35242 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sftpa1P35242 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.29□□□□□ -0.12
Sftpa1P35242 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sftpa1P35242 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sftpa1P35242 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sftpa1P35242 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.28□□□□□ -0.12
Sftpa1P35242 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Gm27437-201ENSMUST00000183429 107 ntBASIC14.28□□□□□ -0.12
Sftpa1P35242 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sftpa1P35242 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.28□□□□□ -0.12
Sftpa1P35242 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sftpa1P35242 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
Sftpa1P35242 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Sftpa1P35242 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sftpa1P35242 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.27□□□□□ -0.12
Sftpa1P35242 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sftpa1P35242 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.27□□□□□ -0.13
Sftpa1P35242 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.27□□□□□ -0.13
Sftpa1P35242 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Sftpa1P35242 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sftpa1P35242 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.27□□□□□ -0.13
Sftpa1P35242 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.27□□□□□ -0.13
Sftpa1P35242 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sftpa1P35242 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Gm13223-201ENSMUST00000118609 747 ntBASIC14.26□□□□□ -0.13
Sftpa1P35242 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.26□□□□□ -0.13
Sftpa1P35242 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Gm38294-201ENSMUST00000192831 381 ntBASIC14.26□□□□□ -0.13
Sftpa1P35242 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms