Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Col2a1P28481 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col2a1P28481 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col2a1P28481 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.42■□□□□ 0.38
Col2a1P28481 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 Gm15483-201ENSMUST00000120338 456 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 Gm11543-201ENSMUST00000120758 370 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col2a1P28481 Gm27920-201ENSMUST00000183953 96 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.42■□□□□ 0.38
Col2a1P28481 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.42■□□□□ 0.38
Col2a1P28481 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col2a1P28481 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.41■□□□□ 0.38
Col2a1P28481 Gm24158-201ENSMUST00000175263 71 ntBASIC17.41■□□□□ 0.38
Col2a1P28481 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.41■□□□□ 0.38
Col2a1P28481 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.41■□□□□ 0.38
Col2a1P28481 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Col2a1P28481 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col2a1P28481 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Col2a1P28481 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.4■□□□□ 0.38
Col2a1P28481 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.4■□□□□ 0.38
Col2a1P28481 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.4■□□□□ 0.38
Col2a1P28481 Gm22175-201ENSMUST00000175007 78 ntBASIC17.4■□□□□ 0.38
Col2a1P28481 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.4■□□□□ 0.38
Col2a1P28481 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.4■□□□□ 0.38
Col2a1P28481 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col2a1P28481 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col2a1P28481 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col2a1P28481 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.39■□□□□ 0.37
Col2a1P28481 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.39■□□□□ 0.37
Col2a1P28481 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.39■□□□□ 0.37
Col2a1P28481 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.39■□□□□ 0.37
Col2a1P28481 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Col2a1P28481 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.39■□□□□ 0.37
Col2a1P28481 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.39■□□□□ 0.37
Col2a1P28481 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col2a1P28481 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Gm7063-201ENSMUST00000186840 981 ntBASIC17.38■□□□□ 0.37
Col2a1P28481 Gm29541-201ENSMUST00000191351 678 ntBASIC17.38■□□□□ 0.37
Col2a1P28481 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col2a1P28481 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col2a1P28481 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms