Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.93□□□□□ -0.34
Col8a2P25318 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.93□□□□□ -0.34
Col8a2P25318 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col8a2P25318 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col8a2P25318 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col8a2P25318 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.92□□□□□ -0.34
Col8a2P25318 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col8a2P25318 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.92□□□□□ -0.34
Col8a2P25318 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Gm37153-201ENSMUST00000193637 231 ntBASIC12.92□□□□□ -0.34
Col8a2P25318 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.92□□□□□ -0.34
Col8a2P25318 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.92□□□□□ -0.34
Col8a2P25318 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col8a2P25318 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.92□□□□□ -0.34
Col8a2P25318 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col8a2P25318 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.92□□□□□ -0.34
Col8a2P25318 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Col8a2P25318 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Col8a2P25318 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col8a2P25318 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col8a2P25318 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.91□□□□□ -0.34
Col8a2P25318 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col8a2P25318 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col8a2P25318 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Gm8000-201ENSMUST00000188378 592 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 Gm9682-201ENSMUST00000197505 556 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.91□□□□□ -0.34
Col8a2P25318 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.91□□□□□ -0.34
Col8a2P25318 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col8a2P25318 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col8a2P25318 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col8a2P25318 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.91□□□□□ -0.34
Col8a2P25318 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col8a2P25318 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col8a2P25318 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms