Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Asic1-205ENSMUST00000228185 1818 ntBASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Gm44454-201ENSMUST00000198541 138 ntBASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tnfrsf1aP25118 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Gm27704-201ENSMUST00000185094 107 ntBASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf1aP25118 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Olfr129-201ENSMUST00000122318 993 ntBASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Gm9172-201ENSMUST00000212092 954 ntBASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Gm7367-201ENSMUST00000057611 492 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms