Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clk1P22518 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.44□□□□□ -0.1
Clk1P22518 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.44□□□□□ -0.1
Clk1P22518 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Clk1P22518 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.44□□□□□ -0.1
Clk1P22518 Gm25406-201ENSMUST00000157599 105 ntBASIC14.44□□□□□ -0.1
Clk1P22518 Gm17807-201ENSMUST00000186869 298 ntBASIC14.44□□□□□ -0.1
Clk1P22518 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Clk1P22518 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clk1P22518 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clk1P22518 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Clk1P22518 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.44□□□□□ -0.1
Clk1P22518 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk1P22518 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Clk1P22518 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk1P22518 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Clk1P22518 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk1P22518 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.43□□□□□ -0.1
Clk1P22518 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.43□□□□□ -0.1
Clk1P22518 Gm18669-201ENSMUST00000216049 778 ntBASIC14.43□□□□□ -0.1
Clk1P22518 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Clk1P22518 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.43□□□□□ -0.1
Clk1P22518 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk1P22518 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Clk1P22518 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clk1P22518 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk1P22518 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Clk1P22518 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Gm6257-201ENSMUST00000163864 910 ntBASIC14.42□□□□□ -0.1
Clk1P22518 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.42□□□□□ -0.1
Clk1P22518 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk1P22518 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk1P22518 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk1P22518 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Clk1P22518 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Clk1P22518 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clk1P22518 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms