Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccl3P10855 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.65□□□□□ -0.22
Ccl3P10855 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Ccl3P10855 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.64□□□□□ -0.23
Ccl3P10855 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.64□□□□□ -0.23
Ccl3P10855 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Ccl3P10855 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Ccl3P10855 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccl3P10855 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccl3P10855 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.64□□□□□ -0.23
Ccl3P10855 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.64□□□□□ -0.23
Ccl3P10855 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccl3P10855 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl3P10855 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccl3P10855 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccl3P10855 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Gm25287-201ENSMUST00000103846 110 ntBASIC13.63□□□□□ -0.23
Ccl3P10855 Gm22918-201ENSMUST00000103855 110 ntBASIC13.63□□□□□ -0.23
Ccl3P10855 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Gm5186-201ENSMUST00000218781 920 ntBASIC13.63□□□□□ -0.23
Ccl3P10855 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.63□□□□□ -0.23
Ccl3P10855 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccl3P10855 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccl3P10855 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.63□□□□□ -0.23
Ccl3P10855 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl3P10855 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccl3P10855 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccl3P10855 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccl3P10855 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccl3P10855 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccl3P10855 Gm27622-201ENSMUST00000183779 60 ntBASIC13.62□□□□□ -0.23
Ccl3P10855 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccl3P10855 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.62□□□□□ -0.23
Ccl3P10855 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccl3P10855 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccl3P10855 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl3P10855 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccl3P10855 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms