Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.49□□□□□ -0.09
Sod1P08228 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sod1P08228 Gm5779-201ENSMUST00000218467 910 ntBASIC14.49□□□□□ -0.09
Sod1P08228 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.49□□□□□ -0.09
Sod1P08228 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sod1P08228 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sod1P08228 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.49□□□□□ -0.09
Sod1P08228 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Sod1P08228 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sod1P08228 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.48□□□□□ -0.09
Sod1P08228 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Gm2810-201ENSMUST00000118681 990 ntBASIC14.48□□□□□ -0.09
Sod1P08228 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Sod1P08228 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.48□□□□□ -0.09
Sod1P08228 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.48□□□□□ -0.09
Sod1P08228 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sod1P08228 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.48□□□□□ -0.09
Sod1P08228 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sod1P08228 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
Sod1P08228 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.47□□□□□ -0.09
Sod1P08228 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.47□□□□□ -0.09
Sod1P08228 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.47□□□□□ -0.09
Sod1P08228 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.47□□□□□ -0.09
Sod1P08228 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.47□□□□□ -0.09
Sod1P08228 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.47□□□□□ -0.09
Sod1P08228 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.47□□□□□ -0.09
Sod1P08228 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Sod1P08228 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.47□□□□□ -0.09
Sod1P08228 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sod1P08228 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Sod1P08228 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sod1P08228 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sod1P08228 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sod1P08228 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.46□□□□□ -0.09
Sod1P08228 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.46□□□□□ -0.09
Sod1P08228 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sod1P08228 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sod1P08228 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.46□□□□□ -0.09
Sod1P08228 Gm18737-201ENSMUST00000173594 937 ntBASIC14.46□□□□□ -0.09
Sod1P08228 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sod1P08228 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sod1P08228 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms