Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a1P02463 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col4a1P02463 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.85■□□□□ 0.61
Col4a1P02463 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Col4a1P02463 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.85■□□□□ 0.61
Col4a1P02463 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a1P02463 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.84■□□□□ 0.61
Col4a1P02463 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.84■□□□□ 0.61
Col4a1P02463 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
Col4a1P02463 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.84■□□□□ 0.61
Col4a1P02463 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col4a1P02463 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a1P02463 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a1P02463 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a1P02463 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Col4a1P02463 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.83■□□□□ 0.61
Col4a1P02463 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a1P02463 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Col4a1P02463 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Col4a1P02463 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Col4a1P02463 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a1P02463 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a1P02463 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a1P02463 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a1P02463 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a1P02463 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a1P02463 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col4a1P02463 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a1P02463 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Col4a1P02463 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Col4a1P02463 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col4a1P02463 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.82■□□□□ 0.6
Col4a1P02463 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col4a1P02463 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col4a1P02463 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.82■□□□□ 0.6
Col4a1P02463 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.82■□□□□ 0.6
Col4a1P02463 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a1P02463 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Col4a1P02463 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col4a1P02463 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.81■□□□□ 0.6
Col4a1P02463 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.81■□□□□ 0.6
Col4a1P02463 Gm27306-201ENSMUST00000183970 107 ntBASIC18.81■□□□□ 0.6
Col4a1P02463 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Col4a1P02463 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a1P02463 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a1P02463 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a1P02463 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col4a1P02463 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.8■□□□□ 0.6
Col4a1P02463 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col4a1P02463 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.8■□□□□ 0.6
Col4a1P02463 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.8■□□□□ 0.6
Col4a1P02463 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a1P02463 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.8■□□□□ 0.6
Col4a1P02463 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.8■□□□□ 0.6
Col4a1P02463 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a1P02463 Gm17837-201ENSMUST00000186435 985 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms