Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
P01852 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P01852 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
P01852 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.16□□□□□ -0.14
P01852 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P01852 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Gm7230-201ENSMUST00000173026 815 ntBASIC14.16□□□□□ -0.14
P01852 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.16□□□□□ -0.14
P01852 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Gm6089-201ENSMUST00000197666 938 ntBASIC14.16□□□□□ -0.14
P01852 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.16□□□□□ -0.14
P01852 Gm10060-201ENSMUST00000212002 111 ntBASIC14.16□□□□□ -0.14
P01852 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.16□□□□□ -0.14
P01852 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.16□□□□□ -0.14
P01852 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.16□□□□□ -0.14
P01852 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.16□□□□□ -0.14
P01852 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01852 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.15□□□□□ -0.14
P01852 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.15□□□□□ -0.14
P01852 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.15□□□□□ -0.14
P01852 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P01852 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.15□□□□□ -0.14
P01852 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P01852 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P01852 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.15□□□□□ -0.14
P01852 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
P01852 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P01852 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P01852 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01852 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.15□□□□□ -0.14
P01852 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.14□□□□□ -0.15
P01852 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.14□□□□□ -0.15
P01852 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.14□□□□□ -0.15
P01852 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Gm19164-201ENSMUST00000210667 640 ntBASIC14.14□□□□□ -0.15
P01852 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P01852 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01852 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms