Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
P01734 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
P01734 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01734 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P01734 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P01734 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P01734 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Gm14722-201ENSMUST00000118943 689 ntBASIC16.82■□□□□ 0.28
P01734 Gm14140-201ENSMUST00000119999 995 ntBASIC16.82■□□□□ 0.28
P01734 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.82■□□□□ 0.28
P01734 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.82■□□□□ 0.28
P01734 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.82■□□□□ 0.28
P01734 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.82■□□□□ 0.28
P01734 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.82■□□□□ 0.28
P01734 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.82■□□□□ 0.28
P01734 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P01734 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01734 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.81■□□□□ 0.28
P01734 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.81■□□□□ 0.28
P01734 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.81■□□□□ 0.28
P01734 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.81■□□□□ 0.28
P01734 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.81■□□□□ 0.28
P01734 Gm7787-201ENSMUST00000216858 688 ntBASIC16.81■□□□□ 0.28
P01734 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01734 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01734 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P01734 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P01734 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.8■□□□□ 0.28
P01734 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
P01734 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01734 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01734 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P01734 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01734 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
P01734 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.79■□□□□ 0.28
P01734 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms