Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.69■□□□□ 0.26
Vti1aO89116 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.69■□□□□ 0.26
Vti1aO89116 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.69■□□□□ 0.26
Vti1aO89116 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.69■□□□□ 0.26
Vti1aO89116 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.69■□□□□ 0.26
Vti1aO89116 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vti1aO89116 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vti1aO89116 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vti1aO89116 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Vti1aO89116 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.68■□□□□ 0.26
Vti1aO89116 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.68■□□□□ 0.26
Vti1aO89116 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.68■□□□□ 0.26
Vti1aO89116 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.68■□□□□ 0.26
Vti1aO89116 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1aO89116 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vti1aO89116 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.67■□□□□ 0.26
Vti1aO89116 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.67■□□□□ 0.26
Vti1aO89116 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.67■□□□□ 0.26
Vti1aO89116 Gm26308-201ENSMUST00000157768 69 ntBASIC16.67■□□□□ 0.26
Vti1aO89116 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.67■□□□□ 0.26
Vti1aO89116 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Vti1aO89116 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vti1aO89116 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1aO89116 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Vti1aO89116 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.66■□□□□ 0.26
Vti1aO89116 Gm11764-201ENSMUST00000120221 623 ntBASIC16.66■□□□□ 0.26
Vti1aO89116 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.66■□□□□ 0.26
Vti1aO89116 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Mir8117-201ENSMUST00000184773 107 ntBASIC16.66■□□□□ 0.26
Vti1aO89116 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Gm45167-201ENSMUST00000208007 322 ntBASIC16.66■□□□□ 0.26
Vti1aO89116 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vti1aO89116 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.66■□□□□ 0.26
Vti1aO89116 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.66■□□□□ 0.26
Vti1aO89116 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.66■□□□□ 0.26
Vti1aO89116 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.66■□□□□ 0.26
Vti1aO89116 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1aO89116 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Vti1aO89116 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vti1aO89116 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms