Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh2d1aO88890 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sh2d1aO88890 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.97□□□□□ -0.65
Sh2d1aO88890 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Gm7284-201ENSMUST00000131667 944 ntBASIC10.97□□□□□ -0.65
Sh2d1aO88890 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.97□□□□□ -0.65
Sh2d1aO88890 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.97□□□□□ -0.65
Sh2d1aO88890 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh2d1aO88890 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms