Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.85□□□□□ -0.03
Best1O88870 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Gm27702-201ENSMUST00000184512 56 ntBASIC14.85□□□□□ -0.03
Best1O88870 Gm44492-201ENSMUST00000197012 141 ntBASIC14.85□□□□□ -0.03
Best1O88870 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.85□□□□□ -0.03
Best1O88870 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Best1O88870 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Best1O88870 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Best1O88870 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Best1O88870 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Best1O88870 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Best1O88870 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.84□□□□□ -0.03
Best1O88870 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.84□□□□□ -0.03
Best1O88870 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.84□□□□□ -0.03
Best1O88870 Thap2-203ENSMUST00000218989 527 ntBASIC14.84□□□□□ -0.03
Best1O88870 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.84□□□□□ -0.03
Best1O88870 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Best1O88870 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Best1O88870 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Best1O88870 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Best1O88870 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Best1O88870 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Best1O88870 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Best1O88870 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Best1O88870 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Best1O88870 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Gm45747-201ENSMUST00000212203 999 ntBASIC14.83□□□□□ -0.04
Best1O88870 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.83□□□□□ -0.04
Best1O88870 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Best1O88870 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Best1O88870 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Best1O88870 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Best1O88870 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Best1O88870 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Best1O88870 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.82□□□□□ -0.04
Best1O88870 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Best1O88870 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.82□□□□□ -0.04
Best1O88870 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Best1O88870 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Best1O88870 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.81□□□□□ -0.04
Best1O88870 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.81□□□□□ -0.04
Best1O88870 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Best1O88870 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms