Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShdO88834 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ShdO88834 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Gm11780-201ENSMUST00000136880 516 ntBASIC15.83■□□□□ 0.12
ShdO88834 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.83■□□□□ 0.12
ShdO88834 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.83■□□□□ 0.12
ShdO88834 Gm27646-201ENSMUST00000183989 110 ntBASIC15.83■□□□□ 0.12
ShdO88834 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.83■□□□□ 0.12
ShdO88834 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
ShdO88834 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ShdO88834 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShdO88834 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.82■□□□□ 0.12
ShdO88834 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.82■□□□□ 0.12
ShdO88834 Gm13418-201ENSMUST00000119097 944 ntBASIC15.82■□□□□ 0.12
ShdO88834 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.82■□□□□ 0.12
ShdO88834 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.82■□□□□ 0.12
ShdO88834 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.82■□□□□ 0.12
ShdO88834 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.82■□□□□ 0.12
ShdO88834 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.82■□□□□ 0.12
ShdO88834 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ShdO88834 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.82■□□□□ 0.12
ShdO88834 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.82■□□□□ 0.12
ShdO88834 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShdO88834 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.82■□□□□ 0.12
ShdO88834 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.81■□□□□ 0.12
ShdO88834 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ShdO88834 Gm4535-201ENSMUST00000182274 558 ntBASIC15.81■□□□□ 0.12
ShdO88834 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.81■□□□□ 0.12
ShdO88834 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Gm5864-201ENSMUST00000202263 970 ntBASIC15.81■□□□□ 0.12
ShdO88834 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.81■□□□□ 0.12
ShdO88834 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.81■□□□□ 0.12
ShdO88834 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.81■□□□□ 0.12
ShdO88834 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Gm10355-201ENSMUST00000097146 517 ntBASIC15.81■□□□□ 0.12
ShdO88834 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ShdO88834 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ShdO88834 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ShdO88834 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
ShdO88834 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
ShdO88834 Gm28659-201ENSMUST00000188013 759 ntBASIC15.8■□□□□ 0.12
ShdO88834 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.8■□□□□ 0.12
ShdO88834 Gm6296-201ENSMUST00000222599 943 ntBASIC15.8■□□□□ 0.12
ShdO88834 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShdO88834 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms