Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.43■□□□□ 0.38
Stx1aO35526 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Stx1aO35526 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Stx1aO35526 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.42■□□□□ 0.38
Stx1aO35526 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.42■□□□□ 0.38
Stx1aO35526 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stx1aO35526 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stx1aO35526 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.41■□□□□ 0.38
Stx1aO35526 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Stx1aO35526 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Efs-202ENSMUST00000227037 2540 ntBASIC17.41■□□□□ 0.38
Stx1aO35526 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Stx1aO35526 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Stx1aO35526 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Stx1aO35526 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Stx1aO35526 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Stx1aO35526 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stx1aO35526 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Stx1aO35526 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Stx1aO35526 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.4■□□□□ 0.38
Stx1aO35526 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.4■□□□□ 0.38
Stx1aO35526 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.4■□□□□ 0.38
Stx1aO35526 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Stx1aO35526 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.4■□□□□ 0.38
Stx1aO35526 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Stx1aO35526 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Stx1aO35526 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Stx1aO35526 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Stx1aO35526 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Stx1aO35526 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Stx1aO35526 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms