Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.28□□□□□ -0.44
Efnb3O35393 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Efnb3O35393 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.28□□□□□ -0.44
Efnb3O35393 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Gm9987-201ENSMUST00000069768 567 ntBASIC12.28□□□□□ -0.44
Efnb3O35393 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Efnb3O35393 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Efnb3O35393 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Efnb3O35393 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Efnb3O35393 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Efnb3O35393 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.27□□□□□ -0.45
Efnb3O35393 Gm13836-201ENSMUST00000121159 501 ntBASIC12.27□□□□□ -0.45
Efnb3O35393 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Efnb3O35393 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.27□□□□□ -0.45
Efnb3O35393 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Efnb3O35393 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Efnb3O35393 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.27□□□□□ -0.45
Efnb3O35393 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Efnb3O35393 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Efnb3O35393 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Efnb3O35393 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.26□□□□□ -0.45
Efnb3O35393 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.26□□□□□ -0.45
Efnb3O35393 Gm6257-201ENSMUST00000163864 910 ntBASIC12.26□□□□□ -0.45
Efnb3O35393 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Efnb3O35393 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Mir1668-201ENSMUST00000184114 107 ntBASIC12.26□□□□□ -0.45
Efnb3O35393 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.26□□□□□ -0.45
Efnb3O35393 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.26□□□□□ -0.45
Efnb3O35393 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.26□□□□□ -0.45
Efnb3O35393 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Efnb3O35393 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Efnb3O35393 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Efnb3O35393 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Efnb3O35393 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms