Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.35□□□□□ -0.11
Capn1O35350 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Capn1O35350 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.35□□□□□ -0.11
Capn1O35350 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Capn1O35350 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Capn1O35350 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Gm8000-201ENSMUST00000188378 592 ntBASIC14.35□□□□□ -0.11
Capn1O35350 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.35□□□□□ -0.11
Capn1O35350 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 AV026068-213ENSMUST00000223675 1171 ntBASIC14.35□□□□□ -0.11
Capn1O35350 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.35□□□□□ -0.11
Capn1O35350 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Capn1O35350 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.35□□□□□ -0.11
Capn1O35350 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Capn1O35350 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Capn1O35350 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.34□□□□□ -0.11
Capn1O35350 Gm11779-201ENSMUST00000118541 368 ntBASIC14.34□□□□□ -0.11
Capn1O35350 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Gm6550-201ENSMUST00000187574 993 ntBASIC14.34□□□□□ -0.11
Capn1O35350 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.34□□□□□ -0.11
Capn1O35350 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.34□□□□□ -0.11
Capn1O35350 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Gm15590-201ENSMUST00000078419 552 ntBASIC14.34□□□□□ -0.11
Capn1O35350 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.34□□□□□ -0.11
Capn1O35350 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Capn1O35350 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Capn1O35350 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Capn1O35350 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Capn1O35350 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Capn1O35350 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Capn1O35350 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Capn1O35350 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Capn1O35350 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Capn1O35350 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Capn1O35350 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.33□□□□□ -0.12
Capn1O35350 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Capn1O35350 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Capn1O35350 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Capn1O35350 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Capn1O35350 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.33□□□□□ -0.12
Capn1O35350 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms