Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.94■□□□□ 0.14
Trove2O08848 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.93■□□□□ 0.14
Trove2O08848 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trove2O08848 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Trove2O08848 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trove2O08848 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trove2O08848 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.93■□□□□ 0.14
Trove2O08848 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Gm18032-201ENSMUST00000222541 538 ntBASIC15.93■□□□□ 0.14
Trove2O08848 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trove2O08848 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trove2O08848 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.92■□□□□ 0.14
Trove2O08848 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trove2O08848 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Gm10013-201ENSMUST00000106074 672 ntBASIC15.92■□□□□ 0.14
Trove2O08848 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trove2O08848 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trove2O08848 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.92■□□□□ 0.14
Trove2O08848 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
Trove2O08848 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trove2O08848 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.92■□□□□ 0.14
Trove2O08848 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.92■□□□□ 0.14
Trove2O08848 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Gm11355-201ENSMUST00000121120 306 ntBASIC15.91■□□□□ 0.14
Trove2O08848 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.91■□□□□ 0.14
Trove2O08848 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trove2O08848 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trove2O08848 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms