Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11bO08712 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Gm27867-201ENSMUST00000184778 125 ntBASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf11bO08712 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Gm19164-201ENSMUST00000210667 640 ntBASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf11bO08712 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Gm14722-201ENSMUST00000118943 689 ntBASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Gm7284-201ENSMUST00000131667 944 ntBASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf11bO08712 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms