Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim34bJ3QNR8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim34bJ3QNR8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim34bJ3QNR8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim34bJ3QNR8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Gm14701-201ENSMUST00000117156 348 ntBASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Gm45612-201ENSMUST00000211320 160 ntBASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trim34bJ3QNR8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim34bJ3QNR8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim34bJ3QNR8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Gm8396-201ENSMUST00000057361 823 ntBASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim34bJ3QNR8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms