Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.41■□□□□ 0.06
Gm3139J3QK78 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Gm11779-201ENSMUST00000118541 368 ntBASIC15.41■□□□□ 0.06
Gm3139J3QK78 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Gm15467-201ENSMUST00000120582 445 ntBASIC15.41■□□□□ 0.06
Gm3139J3QK78 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Gm27300-201ENSMUST00000184085 97 ntBASIC15.41■□□□□ 0.06
Gm3139J3QK78 Gm27335-201ENSMUST00000184758 97 ntBASIC15.41■□□□□ 0.06
Gm3139J3QK78 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.41■□□□□ 0.06
Gm3139J3QK78 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3139J3QK78 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.4■□□□□ 0.06
Gm3139J3QK78 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.4■□□□□ 0.06
Gm3139J3QK78 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3139J3QK78 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm3139J3QK78 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3139J3QK78 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gm3139J3QK78 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms