Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Gm27646-201ENSMUST00000183989 110 ntBASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdh11xF6ZNL5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44357-201ENSMUST00000195897 142 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm19658-201ENSMUST00000196231 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44367-201ENSMUST00000196836 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44350-201ENSMUST00000197197 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44390-201ENSMUST00000197533 144 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44313-201ENSMUST00000198018 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44486-201ENSMUST00000198508 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44314-201ENSMUST00000199263 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44394-201ENSMUST00000199558 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44484-201ENSMUST00000199873 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44466-201ENSMUST00000200264 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm44359-201ENSMUST00000200671 138 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh11xF6ZNL5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Gm11780-201ENSMUST00000136880 516 ntBASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Gm6376-201ENSMUST00000209407 580 ntBASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh11xF6ZNL5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms