Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Gm9719-201ENSMUST00000162765 543 ntBASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Gm43179-201ENSMUST00000198797 275 ntBASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc188F6WEU2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Gm17420-201ENSMUST00000164753 153 ntBASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc188F6WEU2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Gm28760-201ENSMUST00000185995 736 ntBASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc188F6WEU2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc188F6WEU2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc188F6WEU2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms