Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 AC164567.1-201ENSMUST00000219185 960 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Gm6218-201ENSMUST00000219812 628 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Gm5357-201ENSMUST00000212720 1924 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Gm28631-201ENSMUST00000190740 334 ntBASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hfm1D3Z4R1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Gm5566-201ENSMUST00000116118 459 ntBASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hfm1D3Z4R1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 AC238811.1-201ENSMUST00000225302 441 ntBASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.47■■□□□ 1.03
Hfm1D3Z4R1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Gm43703-201ENSMUST00000200523 763 ntBASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Shd-206ENSMUST00000225145 998 ntBASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Gm6180-201ENSMUST00000065243 498 ntBASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.46■■□□□ 1.03
Hfm1D3Z4R1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hfm1D3Z4R1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hfm1D3Z4R1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hfm1D3Z4R1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Gm8515-201ENSMUST00000194852 576 ntBASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hfm1D3Z4R1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms