Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.42■□□□□ 0.22
Rfx8D3YU81 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.42■□□□□ 0.22
Rfx8D3YU81 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.42■□□□□ 0.22
Rfx8D3YU81 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44357-201ENSMUST00000195897 142 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm19658-201ENSMUST00000196231 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44367-201ENSMUST00000196836 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44350-201ENSMUST00000197197 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44390-201ENSMUST00000197533 144 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44313-201ENSMUST00000198018 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44486-201ENSMUST00000198508 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44314-201ENSMUST00000199263 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44394-201ENSMUST00000199558 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44484-201ENSMUST00000199873 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44466-201ENSMUST00000200264 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm44359-201ENSMUST00000200671 138 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Gm6376-201ENSMUST00000209407 580 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.41■□□□□ 0.22
Rfx8D3YU81 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx8D3YU81 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfx8D3YU81 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rfx8D3YU81 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rfx8D3YU81 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.39■□□□□ 0.21
Rfx8D3YU81 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.39■□□□□ 0.21
Rfx8D3YU81 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Gm27741-201ENSMUST00000185060 237 ntBASIC16.39■□□□□ 0.21
Rfx8D3YU81 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Gm6296-201ENSMUST00000222599 943 ntBASIC16.39■□□□□ 0.21
Rfx8D3YU81 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx8D3YU81 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms