Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tmf1B9EKI3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.91■□□□□ 0.94
Tmf1B9EKI3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Gm10499-201ENSMUST00000174094 934 ntBASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmf1B9EKI3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tmf1B9EKI3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tmf1B9EKI3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tmf1B9EKI3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tmf1B9EKI3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Gm12260-201ENSMUST00000122447 411 ntBASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Gm43575-201ENSMUST00000196420 516 ntBASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmf1B9EKI3 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmf1B9EKI3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.87■□□□□ 0.93
Tmf1B9EKI3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms