Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.59□□□□□ -0.55
Col6a5A6H584 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col6a5A6H584 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a5A6H584 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Gm5566-201ENSMUST00000116118 459 ntBASIC11.59□□□□□ -0.55
Col6a5A6H584 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a5A6H584 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a5A6H584 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a5A6H584 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a5A6H584 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.58□□□□□ -0.55
Col6a5A6H584 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.58□□□□□ -0.55
Col6a5A6H584 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a5A6H584 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Gm14660-201ENSMUST00000119809 575 ntBASIC11.58□□□□□ -0.56
Col6a5A6H584 Gm28760-201ENSMUST00000185995 736 ntBASIC11.58□□□□□ -0.56
Col6a5A6H584 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Col6a5A6H584 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a5A6H584 Gm5112-201ENSMUST00000204407 2368 ntBASIC11.57□□□□□ -0.56
Col6a5A6H584 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Gm13350-201ENSMUST00000120519 479 ntBASIC11.57□□□□□ -0.56
Col6a5A6H584 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.57□□□□□ -0.56
Col6a5A6H584 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Dupd1-202ENSMUST00000224735 548 ntBASIC11.57□□□□□ -0.56
Col6a5A6H584 Gm15823-201ENSMUST00000064305 670 ntBASIC11.57□□□□□ -0.56
Col6a5A6H584 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a5A6H584 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm6257-201ENSMUST00000163864 910 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms