Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.05□□□□□ -0.32
Col6a4A2AX52 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Gm13823-201ENSMUST00000119930 345 ntBASIC13.05□□□□□ -0.32
Col6a4A2AX52 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.05□□□□□ -0.32
Col6a4A2AX52 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.05□□□□□ -0.32
Col6a4A2AX52 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Gm7730-201ENSMUST00000212486 454 ntBASIC13.05□□□□□ -0.32
Col6a4A2AX52 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.05□□□□□ -0.32
Col6a4A2AX52 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.04□□□□□ -0.32
Col6a4A2AX52 Gm18489-201ENSMUST00000172565 551 ntBASIC13.04□□□□□ -0.32
Col6a4A2AX52 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.04□□□□□ -0.32
Col6a4A2AX52 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Gm5779-201ENSMUST00000218467 910 ntBASIC13.04□□□□□ -0.32
Col6a4A2AX52 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col6a4A2AX52 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Rpph1-201ENSMUST00000175096 319 ntBASIC13.03□□□□□ -0.32
Col6a4A2AX52 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms